New Tool For Imaging Biomolecules
Jay Groves is a chemist who holds appointments with Berkeley Lab, UC Berkeley and HHMI. Image: Photo by Roy Kaltschmidt, Berkeley Lab
These interactions, in turn, are greatly influenced by the spatial patterning of signalling and receptor molecules. The ability to observe signalling spatial patterns in the immune and other cellular systems as they evolve, and to study the impact on molecular interactions and, ultimately, cellular communication, would be a critical tool in the fight against immunological and other disorders that lead to a broad range of health problems including cancer. Such a tool is now at hand.
Researchers with the U.S. Department of Energy (DOE)’s Lawrence Berkeley National Laboratory (Berkeley Lab) and the University of California (UC) Berkeley, have developed the first practical application of optical nanoantennas in cell membrane biology. A scientific team led by chemist Jay Groves has developed a technique for lacing artificial lipid membranes with billions of gold “bowtie” nanoantennas. Through the phenomenon known as “plasmonics,” these nanoantennas can boost the intensity of a fluorescent or Raman optical signal from a protein passing through a plasmonic “hot-spot” tens of thousands of times without the protein ever being touched.
“Our technique is minimally invasive since enhancement of optical signals is achieved without requiring the molecules to directly interact with the nanoantenna,” Groves says. “This is an important improvement over methods that rely on adsorption of molecules directly onto antennas where their structure, orientation, and behaviour can all be altered.”
Groves holds joint appointments with Berkeley Lab’s Physical Biosciences Division and UC Berkeley’s Chemistry Department, and is also a Howard Hughes Medical Institute investigator. He is the corresponding author of a paper that reports these results in the journal NanoLetters. The paper is titled “Single Molecule Tracking on Supported Membranes with Arrays of Optical Nanoantennas.” Co-authoring the paper were Theo Lohmuller, Lars Iversen, Mark Schmidt, Christopher Rhodes, Hsiung-Lin Tu and Wan-Chen Lin.

Gold triangle nanoparticles paired tip-to-tip in a bow-tie formation, serve as optical antennas. When a protein (green) bound to a fluorescently labeled SOS-catalyst passes through the the gaps between opposing tips of the triangles (plasmonic hot spots) fluorescence is amplified. Image: Groves, et. al., Berkeley Lab
“We’re able to fabricate billions of gold nanoantennas in an artificial membrane through a combination of colloid lithography and plasma processing,” Groves says. “Controlled spacing of the nanoantenna gaps is achieved by taking advantage of the fact that polystyrene particles melt together at their contact point during plasma processing. The result is well-defined spacing between each pair of gold triangles in the final array with a tip-to-tip distance between neighbouring gold nanotriangles measuring in the 5-to-100 nanometer range.”
Until now, Groves says, it has not been possible to decouple the size of the gold nanotriangles, which determines their surface plasmon resonance frequency, from the tip-to-tip distance between the individual nanoparticle features, which is responsible for enhancing the plasmonic effect. With their colloidal lithography approach, a self-assembling hexagonal monolayer of polymer spheres is used to shadow mask a substrate for subsequent deposition of the gold nanoparticles. When the colloidal mask is removed, what remains are large arrays of gold nanoparticles and triangles over which the artificial membrane can be formed.
The unique artificial membranes, which Groves and his research group developed earlier, are another key to the success of this latest achievement. Made from a fluid bilayer of lipid molecules, these membranes are the first biological platforms that can combine fixed nanopatterning with the mobility of fluid bilayers. They provide an unprecedented capability for the study of how the spatial patterns of chemical and physical properties on membrane surfaces influence the behaviour of cells.
“When we embed our artificial membranes with gold nanoantennas we can trace the trajectories of freely diffusing individual proteins as they sequentially pass through and are enhanced by the multiple gaps between the triangles,” Groves says. “This allows us to study a realistic system, like a cell, which can involve billions of molecules, without the static entrapment of the molecules.”
As molecules in living cells are generally in a state of perpetual motion, it is often their movement and interactions with other molecules rather than static positions that determine their functions within the cell. Groves says that any technique requiring direct adsorption of a molecule of interest onto a nanoantenna intrinsically removes that molecule from the functioning ensemble that is the essence of its natural behaviour. The technique he and his co-authors have developed allows them to look at individual biomolecules but within the context of their surrounding community.
“The idea that optical nanoantennas can produce the kinds of enhanced signals we are observing has been known for years but this is the first time that nanoantennas have been fabricated into a fluid membrane so that we can observe every molecule in the system as it passes through the antenna array,” Groves says. “This is more than a proof-of-concept we’ve shown that we now have a useful new tool to add to our repertoire.”



















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